PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG001290.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 271aa    MW: 30157.2 Da    PI: 6.5133
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG001290.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like21.45.7e-07192212121
           G2-like   1 kprlrWtpeLHerFveaveqL 21 
                       k++++Wt+e+He Fv+av+qL
  TRIDC6AG001290.1 192 KKKVEWTTEMHELFVNAVTQL 212
                       6899****************9 PP
2Response_reg424.9e-15211281107
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT..SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg..mdGlellkeireeepklpiivvtahgeeedalea 89 
                       vl vdD+p+ ++ l+q+l++ gy ev++ +++ +al+ ++++   +D i++  +  g  mdG+ l+k+  ++   + i+++++ +++e++++ 
  TRIDC6AG001290.1  21 VLAVDDDPVCLQTLTQMLRRGGY-EVTASASPVDALKEVEKNPdgIDFIMTVARTWGrgMDGFGLVKRVGKRY--PVILMFSGDETMETRERG 110
                       799********************.999999999***99999988999999987776656**********7766..699999************ PP

                       HHTTESEEEESS--HHHH CS
      Response_reg  90 lkaGakdflsKpfdpeel 107
                       l+ Ga     Kp +  ++
  TRIDC6AG001290.1 111 LQEGACYLMDKPLHDVQI 128
                       ************987776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MANGDEDMAT TGLMKTEGLK VLAVDDDPVC LQTLTQMLRR GGYEVTASAS PVDALKEVEK  60
NPDGIDFIMT VARTWGRGMD GFGLVKRVGK RYPVILMFSG DETMETRERG LQEGACYLMD  120
KPLHDVQIYF IWQHVVRWRR KAASAATENP NPRHSQGVHL DDTPRKRGQG LNDSNKGKGA  180
SGGGLQLGTT KKKKVEWTTE MHELFVNAVT QLKTTGDEEL VVVKEEAIQK VSHLAITHGD  240
DVHDMCQGSH DRHDVVQSAF TTLGAQWPLW W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.13e-19ARR-B family protein