PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG001380.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 220aa    MW: 23649.7 Da    PI: 5.7842
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG001380.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix100.21.6e-3127112186
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       rW+k+ev aLi++r+ +++r+++  lk+plWeevs++m++ g+  rs+k+Ckekwen+nk+++k ke+ kkr + + +tcpyfd+l+
  TRIDC6AG001380.3  27 RWPKHEVEALIRVRSGLDNRFQEPGLKGPLWEEVSARMAAAGYgGRSAKRCKEKWENINKYFRKAKESGKKR-PAHAKTCPYFDELD 112
                       8******************************************99*************************98.99999*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
TSHDAGRELV PYECGELSLP LMSSSSRWPK HEVEALIRVR SGLDNRFQEP GLKGPLWEEV  60
SARMAAAGYG GRSAKRCKEK WENINKYFRK AKESGKKRPA HAKTCPYFDE LDRLYSRSGH  120
GSGASSGAGN TSAKAIANAI ATADDAANKA SSELLDAVVK YPTDTHYGPP PGFPNDGKED  180
GAAQHDGEGD VDMGRASGRA GEDHDDEAGQ SHGHDDDDDH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.22e-39Trihelix family protein