PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG005350.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 235aa    MW: 25284.6 Da    PI: 7.0331
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG005350.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.32e-1155116454
                       HHHHHHHHHHHHHHHHHHHHHCTSCC.C.............TTS-STCHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPk.as..........kapskKlsKaeiLekAveYIksL 54 
                       ++  rE+ RRd++N++f eL +++ +             ++++ Kl+Ka+iL  A++ + +L
  TRIDC6AG005350.1  55 SKACREKMRRDKLNDRFLELCSVMNSgKHsgleecsasnSGKNAKLDKASILSDATRMLTQL 116
                       6789**********************6559***************************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
DEFLIGGAGD GGEGLAAFCD GGLGIEDVSG GDSGLGHSNL GKRARDEPSS SGPKSKACRE  60
KMRRDKLNDR FLELCSVMNS GKHSGLEECS ASNSGKNAKL DKASILSDAT RMLTQLRGET  120
EKLKESNSNL RETIKDLKVE KNELRDEKLS LKAEKERLEQ QLKAASAAPT GFAPHMPYPA  180
AFHPAVYPPF APPYQVPANK GAPIPAAFPG MAMWHWLPPT AMDTTQDPKL WPPNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.14e-54bHLH family protein