PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG005350.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 195aa    MW: 21637.7 Da    PI: 9.6824
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG005350.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.4e-111576454
                      HHHHHHHHHHHHHHHHHHHHHCTSCC.C.............TTS-STCHHHHHHHHHHHHHH CS
               HLH  4 ahnerErrRRdriNsafeeLrellPk.as..........kapskKlsKaeiLekAveYIksL 54
                      ++  rE+ RRd++N++f eL +++ +             ++++ Kl+Ka+iL  A++ + +L
  TRIDC6AG005350.2 15 SKACREKMRRDKLNDRFLELCSVMNSgKHsgleecsasnSGKNAKLDKASILSDATRMLTQL 76
                      6789**********************6559***************************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
EKRARDEPSS SGPKSKACRE KMRRDKLNDR FLELCSVMNS GKHSGLEECS ASNSGKNAKL  60
DKASILSDAT RMLTQLRGET EKLKESNSNL RETIKDLKVE KNELRDEKLS LKAEKERLEQ  120
QLKAASAAPT GFAPHMPYPA AFHPAVYPPF APPYQVPANK GAPIPAAFPG MAMWHWLPPT  180
AMDTTQDPKL WPPNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.14e-54bHLH family protein