PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG005350.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 203aa    MW: 22362.7 Da    PI: 9.6827
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG005350.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.71.5e-112384454
                      HHHHHHHHHHHHHHHHHHHHHCTSCC.C.............TTS-STCHHHHHHHHHHHHHH CS
               HLH  4 ahnerErrRRdriNsafeeLrellPk.as..........kapskKlsKaeiLekAveYIksL 54
                      ++  rE+ RRd++N++f eL +++ +             ++++ Kl+Ka+iL  A++ + +L
  TRIDC6AG005350.3 23 SKACREKMRRDKLNDRFLELCSVMNSgKHsgleecsasnSGKNAKLDKASILSDATRMLTQL 84
                      6789**********************6559***************************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
LVLGTLIWGK GARDEPSSSG PKSKACREKM RRDKLNDRFL ELCSVMNSGK HSGLEECSAS  60
NSGKNAKLDK ASILSDATRM LTQLRGETEK LKESNSNLRE TIKDLKVEKN ELRDEKLSLK  120
AEKERLEQQL KAASAAPTGF APHMPYPAAF HPAVYPPFAP PYQVPANKGA PIPAAFPGMA  180
MWHWLPPTAM DTTQDPKLWP PNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-53bHLH family protein