PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG006620.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 119aa    MW: 12621.5 Da    PI: 8.3935
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG006620.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260123.41.2e-38151151100
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 
                       +C aCk+lrrkC+++Cv+ap+f++eq +++f ++hk+FGasnv+kll+ lp  +r++a++++ yeA+ar++dPvyG+v++i++lqqq  +l+a
  TRIDC6AG006620.2  15 PCGACKFLRRKCVSGCVFAPHFCHEQgAAHFGAIHKVFGASNVSKLLTGLPSIDRREAAATISYEAQARLHDPVYGCVAHIFALQQQAVNLQA 107
                       7*************************89***************************************************************** PP

            DUF260  93 elallkee 100
                       +l++lk++
  TRIDC6AG006620.2 108 QLESLKAQ 115
                       ***99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
SIDQVAGAMT GFPSPCGACK FLRRKCVSGC VFAPHFCHEQ GAAHFGAIHK VFGASNVSKL  60
LTGLPSIDRR EAAATISYEA QARLHDPVYG CVAHIFALQQ QAVNLQAQLE SLKAQAPQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42440.11e-51LBD family protein