PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG008750.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 554aa MW: 59108.4 Da PI: 4.3924

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG008750.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.2	6.2e-13	293	336	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 e+Er+RR+++N+++ +Lr+l+P+ +K++ a+iL A++YI Lq TRIDC6AG008750.1 293 EAERKRRRKLNDRLYKLRSLVPNI-----TKMDRASILGDAIDYIVGLQ 336 89*******************7.....7*************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MGGGDYHQQS LIGGAAVHGH GGGTVEAALR PLVGGSHGWD YCMYWRLSPD QRFLEMAGFC 60 CSAEFEAQVA TLADVPCSIP LDSSSIGMHA QALLSNQPIW QSSGGAPGPD LLTGYEAASS 120 GGEKTRLLVP VAGGIVELLA SRYMVEEQQM AELVMAQCGG GGQGWQETEA QGFAWDAAAA 180 ADSGRLYAAA SLNLFDGAGG SGSGEPFLAG VQDDGAAGVG WQYAAESSEP PSTVAQEHQQ 240 LHGSGVGRAD SGSEGSDMQL GDPDDDGNGE TQRGSSKDGK DAEGKRQQCK NLEAERKRRR 300 KLNDRLYKLR SLVPNITKMD RASILGDAID YIVGLQKQVK DLQDELEDPN PPGVTGGDSK 360 APDVLLDDHP PPGLDNDEDS PQQQPFPSAG GKWPRKEEAG DEEEKEAEDQ DMEPQVEVRQ 420 VEGKEFFLQV LCSHKSGRFV RIMDEMAALG LQITSVNVTS YNKLVLNVFR AVMKDNEAAV 480 PADRVRDSLL EVTREMYGGA GAWSSPVPPS PLTNAKLDGM DGQAVPAVAG EHYQLHHQVL 540 GGYHHQHLQY LAMD

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MGGGDYHQQS LIGGAAVHGH GGGTVEAALR PLVGGSHGWD YCMYWRLSPD QRFLEMAGFC  60
CSAEFEAQVA TLADVPCSIP LDSSSIGMHA QALLSNQPIW QSSGGAPGPD LLTGYEAASS  120
GGEKTRLLVP VAGGIVELLA SRYMVEEQQM AELVMAQCGG GGQGWQETEA QGFAWDAAAA  180
ADSGRLYAAA SLNLFDGAGG SGSGEPFLAG VQDDGAAGVG WQYAAESSEP PSTVAQEHQQ  240
LHGSGVGRAD SGSEGSDMQL GDPDDDGNGE TQRGSSKDGK DAEGKRQQCK NLEAERKRRR  300
KLNDRLYKLR SLVPNITKMD RASILGDAID YIVGLQKQVK DLQDELEDPN PPGVTGGDSK  360
APDVLLDDHP PPGLDNDEDS PQQQPFPSAG GKWPRKEEAG DEEEKEAEDQ DMEPQVEVRQ  420
VEGKEFFLQV LCSHKSGRFV RIMDEMAALG LQITSVNVTS YNKLVLNVFR AVMKDNEAAV  480
PADRVRDSLL EVTREMYGGA GAWSSPVPPS PLTNAKLDGM DGQAVPAVAG EHYQLHHQVL  540
GGYHHQHLQY LAMD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	295	302	ERKRRRKL
2	296	300	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	4e-51	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG008750.1