PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG008760.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 550aa MW: 58483.8 Da PI: 4.5326

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG008760.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38	2.9e-12	289	332	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++Er+RR+++N+++ +Lr+l+P+ +K++ a+iL A++YI Lq TRIDC6AG008760.1 289 IAERKRRKKLNNRLYTLRSLVPNI-----TKMDRASILGDAIDYIVGLQ 332 79*******************7.....7*************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MVGGGDYHQA VHGHGGGGGG TVEAALRPLV GGAHGWDYCI YWRLSPDQRF LEMTGFCCSA 60 EFEAQVATLA DVPSSIPLDS SSIGMHAQAL LSNQPIWQSS GGAPGPDLLT GYEAASSGGE 120 KTRLLVPVAG GIVELFASRY MAEEQQMAEL VMAQCGGGGQ GWQETEAQGF AWDAAAAAAA 180 DPGRLYGAAS LNLFDGAGGS GSGEPFLAGV LEDGAAGVGW QYAAESSEPP STVAQEHQQL 240 HGSGVGRADS GSERSDMQLG DPDDNVDGET QRGSGKDGGG KRQQCKNLIA ERKRRKKLNN 300 RLYTLRSLVP NITKMDRASI LGDAIDYIVG LQKQVKDLQD ELEDPNPPGG TGGDSKAPDV 360 LLDDHPPPGL DNDEDSPQQH PFPSAGGKRA RKEEAGEEEE KEAEDQDMEP QVEVRQVEGK 420 EFFLQVLCSH KSGRFVRIMD EIAALGLQIT SVNVTSYNKL VLNVFRAVMK DNEVAVPADR 480 VRDSLLEVTR EMYGGSGAWS SPVPPPPLTN AKLDGMDGQA VPAVAGDHYQ LHHQVLGGYH 540 HQHLHYLAMD

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MVGGGDYHQA VHGHGGGGGG TVEAALRPLV GGAHGWDYCI YWRLSPDQRF LEMTGFCCSA  60
EFEAQVATLA DVPSSIPLDS SSIGMHAQAL LSNQPIWQSS GGAPGPDLLT GYEAASSGGE  120
KTRLLVPVAG GIVELFASRY MAEEQQMAEL VMAQCGGGGQ GWQETEAQGF AWDAAAAAAA  180
DPGRLYGAAS LNLFDGAGGS GSGEPFLAGV LEDGAAGVGW QYAAESSEPP STVAQEHQQL  240
HGSGVGRADS GSERSDMQLG DPDDNVDGET QRGSGKDGGG KRQQCKNLIA ERKRRKKLNN  300
RLYTLRSLVP NITKMDRASI LGDAIDYIVG LQKQVKDLQD ELEDPNPPGG TGGDSKAPDV  360
LLDDHPPPGL DNDEDSPQQH PFPSAGGKRA RKEEAGEEEE KEAEDQDMEP QVEVRQVEGK  420
EFFLQVLCSH KSGRFVRIMD EIAALGLQIT SVNVTSYNKL VLNVFRAVMK DNEVAVPADR  480
VRDSLLEVTR EMYGGSGAWS SPVPPPPLTN AKLDGMDGQA VPAVAGDHYQ LHHQVLGGYH  540
HQHLHYLAMD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	291	298	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	1e-42	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG008760.1