PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG011140.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 302aa    MW: 34663.1 Da    PI: 6.4412
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG011140.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.10.000294467223
                      EETTTTEEESSHHHHHHHHHH..T CS
           zf-C2H2  2 kCpdCgksFsrksnLkrHirt..H 23
                      +C dCgk+++++ +   H ++  H
  TRIDC6AG011140.3 44 VCADCGKPCRSQTEVDLHKKRtgH 67
                      7*****************998666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MAGLSLRCGD CGVQLRSVEE AQAHAEATSH TNFAESTEAV LNLVCADCGK PCRSQTEVDL  60
HKKRTGHAEF TDKTMEAAKP IDLEAPPKPA SEAMDVDASG SAEPQELVSP EVNKEMLGEL  120
ESMGFSTARA TRALHFSGNS TIEGAINWLS EHQEDPDIDE MPMVPANTVA NKPSLTEEEK  180
KIKAQELRER ARKKKEEEEK RMEREREKER IRIGKELLEA KKMEELNERK RIIELRRLEK  240
EEEKRAREKI RQKLEEDKRL NVEENLDCRQ KPQLHPSQVR HRLLKRRRVH FYLSDQPQRQ  300
SG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1282287RLLKRR
2285289KRRRV