PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG013310.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 354aa    MW: 37746 Da    PI: 4.9735
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG013310.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK86.13.2e-27123170552
            RWP-RK   5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                       +sl++l+ yFs+++kdAA++Lgvc+T++KriCRq+GI+RWP+Rki+++
  TRIDC6AG013310.1 123 VSLKELQGYFSGSLKDAARSLGVCPTTMKRICRQHGISRWPFRKISKV 170
                       799******************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
GDDGQVGEEC VVLEFFLPPD CRSAGEQKAM VDAVAATIRK ECSGDHLEAT SDLQDLSLEN  60
VLADADTAHE LNDRGDYDTN DSDEEDGDQA GGVHGADQSG AEDRGPPPET KKKKIGRKAG  120
RPVSLKELQG YFSGSLKDAA RSLGVCPTTM KRICRQHGIS RWPFRKISKV NRALGKIRAI  180
ESVDCSPKPT AASSSTSRRA PAPHLPWLSS ALGEDTSSQG SSQDPPPLTK TTMRKSWLWR  240
SNGAEGELVT IKANYRGDII RFRVPCSAGV AAVKEEVAKR LGLDAGAFDI KYLDDDHEWV  300
VLSCDADFQE CLDVAPGLPA SAAVAAGAGA VSPVVRLMVQ EVADNHRSSC GSSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76350.11e-34Nin-like family protein