PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG014100.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 408aa MW: 43570.9 Da PI: 9.5018

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG014100.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168	3.2e-52	36	168	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l TRIDC6AG014100.3 36 LPPGFRFHPTDEELVVHYLKKKAAKVPLPV-TIIAEVDLYKFDPWELPEKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIL 127 79**************************.89***********988899************************************* PP NAM 94 sk......kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +e+ g+kk Lvfy+g+ pkg kt+W+mheyrl TRIDC6AG014100.3 128 ASgtgcglVREKLGVKKALVFYRGKPPKGLKTNWIMHEYRL 168 98777776677**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MRSMGSSDSS SGSAQKAARH QHEPPPPRQR GSAPELPPGF RFHPTDEELV VHYLKKKAAK 60 VPLPVTIIAE VDLYKFDPWE LPEKATFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT 120 GTDKPILASG TGCGLVREKL GVKKALVFYR GKPPKGLKTN WIMHEYRLTD VSGSTTTSRP 180 PPPVTGGSRA AASLRLDDWV LCRIYKKINK AAAGDQQRST ECEDSVEDAV TAYPLYATAG 240 MAGAGAHGSN YASPSLLHHQ DSHFLEGLFT ADDAGLSAGA TSLSHLAAAA RASPAPTKQF 300 LAPSSSTPFN WLDASPAGIL PQARNFPGFN RSRNVGNMSL SSTADMAGAA GNAVNAMSAF 360 MNPLPVQDGT YHQHHVILGA PLAPEATTGG ATSGFQHPVQ VSGVNWNP

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MRSMGSSDSS SGSAQKAARH QHEPPPPRQR GSAPELPPGF RFHPTDEELV VHYLKKKAAK  60
VPLPVTIIAE VDLYKFDPWE LPEKATFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT  120
GTDKPILASG TGCGLVREKL GVKKALVFYR GKPPKGLKTN WIMHEYRLTD VSGSTTTSRP  180
PPPVTGGSRA AASLRLDDWV LCRIYKKINK AAAGDQQRST ECEDSVEDAV TAYPLYATAG  240
MAGAGAHGSN YASPSLLHHQ DSHFLEGLFT ADDAGLSAGA TSLSHLAAAA RASPAPTKQF  300
LAPSSSTPFN WLDASPAGIL PQARNFPGFN RSRNVGNMSL SSTADMAGAA GNAVNAMSAF  360
MNPLPVQDGT YHQHHVILGA PLAPEATTGG ATSGFQHPVQ VSGVNWNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	8e-87	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG014100.3