PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG014880.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 1135aa MW: 126049 Da PI: 6.3236

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG014880.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70.3	2.6e-22	132	233	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+lt sd++++g +++p++ ae++ +++++++ +l+ +d + ++W++++i+r++++r++lt+GW+ Fv+ ++L +gD+v+F ++ TRIDC6AG014880.2 132 FCKTLTASDTSTHGGFSVPRRAAEKIfpsldfSLQPPCQ-ELQARDIHDNVWTFRHIFRGQPKRHLLTTGWSLFVSGKKLFAGDSVIFV--RD 221 99****************************9999986.*********************************************..56 PP SEE..EEEEE-S CS B3 88 sefelvvkvfrk 99 ++++l+++++r+ TRIDC6AG014880.2 222 EKQQLLLGIRRA 233 88889**997 PP
2	Auxin_resp	114	1.4e-37	258	341	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aaha +++s+F+++YnPras++eFv++++k++ka++ +++s+GmRf+m+ ete+ +rr++Gt++g+sdldpvrW+nS+WrsL+ TRIDC6AG014880.2 258 AAHASANTSPFTIFYNPRASPTEFVIPFAKYQKAMYsSQISLGMRFRMMCETEELGTRRYMGTITGISDLDPVRWKNSQWRSLQ 341 799******************************9899*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1135 aa Download sequence
MAQSPASSAV AASAPCEGER KAPAINGELW HACAGPLVSL PPVGSLVVYF PQGHSEQVAA 60 SMQKDVEAHV PSYPNLPSKL ICLLHSVTLQ ADPDTDEVYA QMTLQPVNTY AKEALQLSEL 120 ALRQARPQME FFCKTLTASD TSTHGGFSVP RRAAEKIFPS LDFSLQPPCQ ELQARDIHDN 180 VWTFRHIFRG QPKRHLLTTG WSLFVSGKKL FAGDSVIFVR DEKQQLLLGI RRANRQPTNI 240 SSSVLSSDSM HIGVLAAAAH ASANTSPFTI FYNPRASPTE FVIPFAKYQK AMYSSQISLG 300 MRFRMMCETE ELGTRRYMGT ITGISDLDPV RWKNSQWRSL QVGWDESAAG ERRNRVSIWE 360 IEPLAAPFFI CPQPFFGVKR PRQLDDESLE MESLMKRAMP WLGEEVCIKD PQTQSATMPG 420 LSLVQWMNMN RQQSSSLAST AMQSEYLRSA SNPAMQNIGA ADLARQLYMQ NHLLQQNSMQ 480 FNPPKLHQQM KPINDLSNAA LPLNQLSAIR NHQDQKQDQQ RQQQSSIQAI PLSQAQAQTN 540 IVQAQVILQN QMQQQQQQKQ PPPSPTQNQH GASGQHLLQS HQLQDQNLQM QQQQLLLHQQ 600 LQQQQQQQQL NKLPGQLANL ASQQTQLSDQ ELHLQLLQKL QQQSLMSQSA VTLSRLPIIQ 660 EQQNFLVDMQ QQLSNSHSLA QQQVMPQQDC RTSSLQTTQL PPPIQQEQQQ QQQQKPSQKQ 720 VAPTYVSEAA FAQISSTSVI PKTGNATIVP GAAQSAVTEE IPSCSTSPST ANGNHLAQPT 780 IGRNDHCKTS TEKVPHSIAQ MSILIPIEAV SVTPVTTKEL PKLNNGVKSS AITSKLPNVV 840 SGLQNFMNNA LPTDNLETAS SATSLWPSQT DGLLHQGFAT SNFNQHQMFK DELPDVEIQG 900 VDPSNSALFG MNNDGPLGFP METEGLLENA LDSVKYQNHF STDDENNYQM QKDARQEIST 960 SMVSQSFGQS DMAFNSIDSA INDGALMNRS SWPPAAPPQR MRTFTKVYKR GAVGRSIDIG 1020 RFSGYGELNQ ALARMFGIEG QLEDRQRIGW KLVYTDHEDD VLLLGDDPWE EFVNCVKCIR 1080 ILSPQEVQKM SLDGDLGSNV LPNQACSSSD GGNTWKPRYE QNSGNPSIGP YDQFE

Sequence ? help Back to Top

Protein Sequence Length: 1135 aa Download sequence

MAQSPASSAV AASAPCEGER KAPAINGELW HACAGPLVSL PPVGSLVVYF PQGHSEQVAA  60
SMQKDVEAHV PSYPNLPSKL ICLLHSVTLQ ADPDTDEVYA QMTLQPVNTY AKEALQLSEL  120
ALRQARPQME FFCKTLTASD TSTHGGFSVP RRAAEKIFPS LDFSLQPPCQ ELQARDIHDN  180
VWTFRHIFRG QPKRHLLTTG WSLFVSGKKL FAGDSVIFVR DEKQQLLLGI RRANRQPTNI  240
SSSVLSSDSM HIGVLAAAAH ASANTSPFTI FYNPRASPTE FVIPFAKYQK AMYSSQISLG  300
MRFRMMCETE ELGTRRYMGT ITGISDLDPV RWKNSQWRSL QVGWDESAAG ERRNRVSIWE  360
IEPLAAPFFI CPQPFFGVKR PRQLDDESLE MESLMKRAMP WLGEEVCIKD PQTQSATMPG  420
LSLVQWMNMN RQQSSSLAST AMQSEYLRSA SNPAMQNIGA ADLARQLYMQ NHLLQQNSMQ  480
FNPPKLHQQM KPINDLSNAA LPLNQLSAIR NHQDQKQDQQ RQQQSSIQAI PLSQAQAQTN  540
IVQAQVILQN QMQQQQQQKQ PPPSPTQNQH GASGQHLLQS HQLQDQNLQM QQQQLLLHQQ  600
LQQQQQQQQL NKLPGQLANL ASQQTQLSDQ ELHLQLLQKL QQQSLMSQSA VTLSRLPIIQ  660
EQQNFLVDMQ QQLSNSHSLA QQQVMPQQDC RTSSLQTTQL PPPIQQEQQQ QQQQKPSQKQ  720
VAPTYVSEAA FAQISSTSVI PKTGNATIVP GAAQSAVTEE IPSCSTSPST ANGNHLAQPT  780
IGRNDHCKTS TEKVPHSIAQ MSILIPIEAV SVTPVTTKEL PKLNNGVKSS AITSKLPNVV  840
SGLQNFMNNA LPTDNLETAS SATSLWPSQT DGLLHQGFAT SNFNQHQMFK DELPDVEIQG  900
VDPSNSALFG MNNDGPLGFP METEGLLENA LDSVKYQNHF STDDENNYQM QKDARQEIST  960
SMVSQSFGQS DMAFNSIDSA INDGALMNRS SWPPAAPPQR MRTFTKVYKR GAVGRSIDIG  1020
RFSGYGELNQ ALARMFGIEG QLEDRQRIGW KLVYTDHEDD VLLLGDDPWE EFVNCVKCIR  1080
ILSPQEVQKM SLDGDLGSNV LPNQACSSSD GGNTWKPRYE QNSGNPSIGP YDQFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG014880.2