PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG015040.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 342aa    MW: 36468 Da    PI: 9.8254
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG015040.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.13.3e-13121170255
                       HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r+ h + Er RR+r+ + f +L  llP++   p  K++K++i+ +A++YIksL+
  TRIDC6AG015040.1 121 RELHIITERERRRRMSEMFTKLHGLLPTL---P-DKVDKSSIVMEAIHYIKSLE 170
                       7889************************6...3.9*****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
RNPVTYFEKT QKLCASFLEA SRKRLLSTSK FHTPCFVFKF CAMAKDNAPP ATSSDSMSSG  60
KGSKGSKASS RMVLGGAIDK GKGVPKVEEQ EEGCRSKGKI MTAPVVAARS DGRSGGRRGD  120
RELHIITERE RRRRMSEMFT KLHGLLPTLP DKVDKSSIVM EAIHYIKSLE GTVSELEKQK  180
LERDFAAGGK LAAAANDGVS SSVAAAMPMG MATPVTGLSG GGIWQTGAAQ APSMALGAVT  240
VAPAPVPLQT WSGPNVVLSL SGNYAYIHMS VARRPGVLTM VTAVLEKHGI DVVTTGISSD  300
RSQCMYTIQA RINGMSNQFG DTVACDDIYK LAVSEIMVWL SD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.15e-31bHLH family protein