PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG015740.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 168aa    MW: 18256.7 Da    PI: 10.2509
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG015740.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.72.9e-1777114136
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkglk 36 
                       C++Cg ++  Tp++Rrgpdg++tLCnaCGl ++ kg++
  TRIDC6AG015740.7  77 CQHCGISSnnTPMMRRGPDGPRTLCNACGLAWANKGMM 114
                       *****99889*************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
ERLNSHRMAS LMRFREKRKE RNFDKKIRYS VRKEVAHRMQ RHKGQFTSSK AKAEEAAAAA  60
NSDWGAVEGR PLSAPVCQHC GISSNNTPMM RRGPDGPRTL CNACGLAWAN KGMMREVKGH  120
TPLKVVPPAT DDANGVAEAP TAEQQHLALE AAPEAPVAPA PAANGHDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.12e-47GATA family protein