PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG016840.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 171aa    MW: 18664.9 Da    PI: 11.701
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG016840.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.62.1e-1540100155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.pse....ngkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV++++++gr++A+++d  ++    ++k+ ++++lg +g +e Aa+a++ a++k++g
  TRIDC6AG016840.1  40 SSYRGVTRHRWTGRFEAHLWDkNTWtepqRKKKgRQVYLGAYGGEEAAARAYDLAALKYWG 100
                       67*******************8777775333446*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MAKQRRSGAG AGNVASDAVR PKPERTRRSV RRGRPSQRTS SYRGVTRHRW TGRFEAHLWD  60
KNTWTEPQRK KKGRQVYLGA YGGEEAAARA YDLAALKYWG RGTVLNFSLS SYGQELKEMR  120
RSPGRSTSAR SGGKALASQE GCPSTEASQG ITTTANGRLG LGVCLATSIS T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79700.18e-28AP2 family protein