PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG017730.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Whirly
Protein Properties Length: 130aa    MW: 14233 Da    PI: 6.9562
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG017730.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly114.29.4e-3649053139
            Whirly  53 qsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139
                       q fals+tev++l++l++ esceffhdp++k+s+eG+v+k+l++ Pl    G+fvn++v n+++k+ne++svPv+kaefav+r++l+
  TRIDC6AG017730.2   4 QLFALSPTEVGSLISLGPAESCEFFHDPSMKSSHEGQVKKSLSITPLGSDNGYFVNITVLNNVQKTNERLSVPVTKAEFAVMRTALS 90 
                       78**********************************************999*********************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
NSLQLFALSP TEVGSLISLG PAESCEFFHD PSMKSSHEGQ VKKSLSITPL GSDNGYFVNI  60
TVLNNVQKTN ERLSVPVTKA EFAVMRTALS FALPHIMGWD QALSTHPQST STSASKPRFE  120
RPNPASEWDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71260.15e-45Whirly family protein