PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG018600.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 153aa MW: 16746.2 Da PI: 10.2067

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG018600.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.1	4.1e-18	30	77	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+llv+ v+++G g+W+++ r+ g+ R++k+c++rw ++l TRIDC6AG018600.1 30 KGPWTPDEDQLLVEHVRRHGEGSWNAVRRETGLLRCGKSCRLRWANHL 77 79****************************99********9996 PP
2	Myb_DNA-binding	28.6	3.4e-09	83	118	1	36
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS- CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRt 36 rg++++eE+ l+++++++ G++ W++I++++ +gR+ TRIDC6AG018600.1 83 RGPFSPEEERLILRLHALIGNK-WARISAHVStTGRS 118 89******************.******988887 PP

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence
MAVEAPQQPE QAAGGSVEQG AAAGGGRLKK GPWTPDEDQL LVEHVRRHGE GSWNAVRRET 60 GLLRCGKSCR LRWANHLRPN LKRGPFSPEE ERLILRLHAL IGNKWARISA HVSTTGRSIP 120 LPRLAIRISC LPLPIDCLVP DLRLHAAAGE DGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	3e-42	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG018600.1