PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG019710.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

DBB

Protein Properties

Length: 212aa MW: 21956 Da PI: 4.6135

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG019710.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.8	1.7e-06	5	45	6	39
zf-B_box 6 CpeHeekelqlfCedCqqllCedClleeHkg.......Htv 39 C+ +++ e+ C ++ lC+ C + H+ H+v TRIDC6AG019710.2 5 CDACGQAEAAVLCCADEAALCRRCDAAVHSAnklagrhHRV 45 *****************************668889996655 PP
2	zf-B_box	27.4	7.1e-09	68	107	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + C+ ++ek +fC +++ llC++C +++H H TRIDC6AG019710.2 68 PACDICQEKTGYFFCVEDRALLCRSCDVAIHTAtphastH 107 67****************************9556644455 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MKIGCDACGQ AEAAVLCCAD EAALCRRCDA AVHSANKLAG RHHRVALLSS TPAGSSSPGA 60 GDDGGSHPAC DICQEKTGYF FCVEDRALLC RSCDVAIHTA TPHASTHRRF LITGVRVGAD 120 QDHIGDVSGA TVSSPSNSSA NGSNNMPTSE NFAIANDQRS EEGVGLIGGG EDDIGQQQQW 180 PWSDIFADDG VGMDQHQCYP GFSEPGSSSL TG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	6e-44	DBB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG019710.2