PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG020020.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 457aa    MW: 50122.9 Da    PI: 4.8186
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG020020.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.31.6e-19131355127
               NAM   5 frFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                       +r +Pt+ e v++yL + ++g++l++ +  i++v+i  +eP+dL +       +   ++ + +fF++ ++k+ ++ ++ r + +g+W+ + k+
  TRIDC6AG020020.1  13 YRLSPTEVEAVTYYLPRLLSGETLQAVDKlIHRVEISGCEPKDLAAryapvpqA--VSSGDRFFFTTCKSKNGSKLQSVRGAGAGTWSIQ-KT 102
                       6899*******************8887766**************8535554322..244478******************99*****976.66 PP

               NAM  90 kevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                       +e+ +  g +vg  + L f     +kg++t Wvm+ey+
  TRIDC6AG020020.1 103 TEISH-AGVKVGEVRNLSFK----KKGKSTGWVMEEYQ 135
                       88988.899**********8....78899********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    
MEGLDVDEVF HHYRLSPTEV EAVTYYLPRL LSGETLQAVD KLIHRVEISG CEPKDLAARY  60
APVPQAVSSG DRFFFTTCKS KNGSKLQSVR GAGAGTWSIQ KTTEISHAGV KVGEVRNLSF  120
KKKGKSTGWV MEEYQCLLPE ATVSDGVKVF CKMHLAQHAP DAARQESAAY KLQQQQPEAA  180
TPSTHAQKRP ATAAAADPHP PRPKKRTCVA VPVPVPASAT PSFLMYDEAA RAMHGPLPHT  240
NFPVQYAQAS CESTTTSSRS DVAQAPEISS QSHVMECTQS QEAGSSIARS TSEEDVFEPL  300
GPISDLPDCG EDGFDLEELM RMMEDDPIEV EPVTEANTGV EMGQQEPLYL DALDQGVLEG  360
MLQSDDPYPM WRSEDQAMHN PAFHDADKEK RYNAASDLDA PWLQGQDHLF KPRPCSFDPF  420
EAAWKAEEAL EKEKRCNAAA NLHAGGHNNF FSPASVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.11e-12NAC family protein