PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG020030.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARR-B

Protein Properties

Length: 614aa MW: 66442.8 Da PI: 7.7121

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG020030.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.6	5.9e-28	209	262	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ +t+e+v+SHLQkYRl TRIDC6AG020030.2 209 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVENITRENVASHLQKYRL 262 79*****************.******************************8 PP
2	Myb_DNA-binding	36.5	1.1e-11	211	261	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ ++ t++++ s++qky+ TRIDC6AG020030.2 211 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvENITRENVASHLQKYR 261 678***********************************************7 PP
3	Response_reg	79.8	9e-27	31	139	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl vdD+p+ +++l+++l++ +y +v+++ ++ al++l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+ge +++ + + TRIDC6AG020030.2 31 VLAVDDDPTCLKVLENLLRRCDY-HVTTTGQAATALRMLRENKdqFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGETQTVMKGIT 121 799******************.***********888889***************87754.558**************** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga d+l Kp+ e+l + TRIDC6AG020030.2 122 HGACDYLLKPVRLEQLKT 139 *************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 614 aa Download sequence
VPCGTRGGRK MTVEGRVGGG GKDKFPVGMR VLAVDDDPTC LKVLENLLRR CDYHVTTTGQ 60 AATALRMLRE NKDQFDLVIS DVHMPDMDGF KLLELVGLEM DLPVIMLSAN GETQTVMKGI 120 THGACDYLLK PVRLEQLKTI WQHVIRRNTK NRGSDNDDAG QKGPNAEGEN GGANRNKRQS 180 RRDRDDNGDD GDDSDENSND NGDSSSQKKP RVVWSVELHR KFVAAVNQLG IDKAVPKKIL 240 DLMNVENITR ENVASHLQKY RLYLKRMSMD ASRQANLVAA LGGRNPAYSN MNSMDVFRHY 300 NNAYGRYRPV PTSSHSQSNN LVARMNSPSA YGMHGLLSPQ SQPLHLGHAQ NNLGTSLNDL 360 GVNNGNLIRG AHMSTMGTGT SGNSFANISN GAPLATTNRA VQSLESNNRQ HLGRINSSST 420 DSFSSFASDS PHFPDLGRSS NTWQTAVPSN IQQLGQNGSM SQASLHGNGP RMEPVSSYTP 480 PSNQITSLGN DMQNQVAPLA SNTLPMVFNQ GAAPFTFGNS TNSREALNSN LAFSNSGINT 540 SLPNLCIDNS VVPRQTLDGG NTGGVPSLQD GKIDQQAVGN QLNYNNNDLV GTSGLQRELS 600 GGLDDIVVDM FRPV

Sequence ? help Back to Top

Protein Sequence Length: 614 aa Download sequence

VPCGTRGGRK MTVEGRVGGG GKDKFPVGMR VLAVDDDPTC LKVLENLLRR CDYHVTTTGQ  60
AATALRMLRE NKDQFDLVIS DVHMPDMDGF KLLELVGLEM DLPVIMLSAN GETQTVMKGI  120
THGACDYLLK PVRLEQLKTI WQHVIRRNTK NRGSDNDDAG QKGPNAEGEN GGANRNKRQS  180
RRDRDDNGDD GDDSDENSND NGDSSSQKKP RVVWSVELHR KFVAAVNQLG IDKAVPKKIL  240
DLMNVENITR ENVASHLQKY RLYLKRMSMD ASRQANLVAA LGGRNPAYSN MNSMDVFRHY  300
NNAYGRYRPV PTSSHSQSNN LVARMNSPSA YGMHGLLSPQ SQPLHLGHAQ NNLGTSLNDL  360
GVNNGNLIRG AHMSTMGTGT SGNSFANISN GAPLATTNRA VQSLESNNRQ HLGRINSSST  420
DSFSSFASDS PHFPDLGRSS NTWQTAVPSN IQQLGQNGSM SQASLHGNGP RMEPVSSYTP  480
PSNQITSLGN DMQNQVAPLA SNTLPMVFNQ GAAPFTFGNS TNSREALNSN LAFSNSGINT  540
SLPNLCIDNS VVPRQTLDGG NTGGVPSLQD GKIDQQAVGN QLNYNNNDLV GTSGLQRELS  600
GGLDDIVVDM FRPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-107	ARR-B family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG020030.2