PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG020030.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARR-B

Protein Properties

Length: 594aa MW: 64250.2 Da PI: 6.5143

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG020030.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.6	5.6e-28	174	227	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ +t+e+v+SHLQkYRl TRIDC6AG020030.5 174 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVENITRENVASHLQKYRL 227 79*****************.******************************8 PP
2	Myb_DNA-binding	36.6	1.1e-11	176	226	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ ++ t++++ s++qky+ TRIDC6AG020030.5 176 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvENITRENVASHLQKYR 226 678***********************************************7 PP
3	Response_reg	59.5	1.8e-20	19	104	25	109
EEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 25 evaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 +v+++ ++ al++l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+ge +++ + + Ga d+l Kp+ e+l + TRIDC6AG020030.5 19 VVTTTGQAATALRMLRENKdqFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKT 104 6899999******888888***************87754.558*********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence
LLGFSFTPFI LCGPPLLLVV TTTGQAATAL RMLRENKDQF DLVISDVHMP DMDGFKLLEL 60 VGLEMDLPVI MLSANGETQT VMKGITHGAC DYLLKPVRLE QLKTIWQHVI RRNTKNRGSD 120 NDDAGQKGPN AEGENGGANR NKRQSRRDRD DNGDDGDDSD ENSNDNGDSS SQKKPRVVWS 180 VELHRKFVAA VNQLGIDKAV PKKILDLMNV ENITRENVAS HLQKYRLYLK RMSMDASRQA 240 NLVAALGGRN PAYSNMNSMD VFRHYNNAYG RYRPVPTSSH SQSNNLVARM NSPSAYGMHG 300 LLSPQSQPLH LGHAQNNLGT SLNDLGVNNG NLIRGAHMST MGTGTSGNSF ANISNGAPLA 360 TTNRAVQSLE SNNRQHLGRI NSSSTDSFSS FASDSPHFPD LGRSSNTWQT AVPSNIQQLG 420 QNGSMSQASL HGNGPRMEPV SSYTPPSNQI TSLGNDMQNQ VAPLASNTLP MVFNQGAAPF 480 TFGNSTNSRE ALNSNLAFSN SGINTSLPNL CIDNSVVPRQ TLDGGNTGGV PSLQDGKIDQ 540 QAVGNQLNYN NNDLVGTSGL QRELSGGLDD IVVDMFRPDN DNGGIFIDTD WGLV

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence

LLGFSFTPFI LCGPPLLLVV TTTGQAATAL RMLRENKDQF DLVISDVHMP DMDGFKLLEL  60
VGLEMDLPVI MLSANGETQT VMKGITHGAC DYLLKPVRLE QLKTIWQHVI RRNTKNRGSD  120
NDDAGQKGPN AEGENGGANR NKRQSRRDRD DNGDDGDDSD ENSNDNGDSS SQKKPRVVWS  180
VELHRKFVAA VNQLGIDKAV PKKILDLMNV ENITRENVAS HLQKYRLYLK RMSMDASRQA  240
NLVAALGGRN PAYSNMNSMD VFRHYNNAYG RYRPVPTSSH SQSNNLVARM NSPSAYGMHG  300
LLSPQSQPLH LGHAQNNLGT SLNDLGVNNG NLIRGAHMST MGTGTSGNSF ANISNGAPLA  360
TTNRAVQSLE SNNRQHLGRI NSSSTDSFSS FASDSPHFPD LGRSSNTWQT AVPSNIQQLG  420
QNGSMSQASL HGNGPRMEPV SSYTPPSNQI TSLGNDMQNQ VAPLASNTLP MVFNQGAAPF  480
TFGNSTNSRE ALNSNLAFSN SGINTSLPNL CIDNSVVPRQ TLDGGNTGGV PSLQDGKIDQ  540
QAVGNQLNYN NNDLVGTSGL QRELSGGLDD IVVDMFRPDN DNGGIFIDTD WGLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	6e-85	ARR-B family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG020030.5