PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG020030.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 513aa MW: 55417.8 Da PI: 7.4705

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG020030.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.9	4.6e-28	93	146	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ +t+e+v+SHLQkYRl TRIDC6AG020030.7 93 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVENITRENVASHLQKYRL 146 79*****************.******************************8 PP
2	Myb_DNA-binding	36.8	8.8e-12	95	145	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ ++ t++++ s++qky+ TRIDC6AG020030.7 95 RVVWSVELHRKFVAAVNQLGIDkaVPKKILDLMNvENITRENVASHLQKYR 145 678***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MKGITHGACD YLLKPVRLEQ LKTIWQHVIR RNTKNRGSDN DDAGQKGPNA EGENGGANRN 60 KRQSRRDRDD NGDDGDDSDE NSNDNGDSSS QKKPRVVWSV ELHRKFVAAV NQLGIDKAVP 120 KKILDLMNVE NITRENVASH LQKYRLYLKR MSMDASRQAN LVAALGGRNP AYSNMNSMDV 180 FRHYNNAYGR YRPVPTSSHS QSNNLVARMN SPSAYGMHGL LSPQSQPLHL GHAQNNLGTS 240 LNDLGVNNGN LIRGAHMSTM GTGTSGNSFA NISNGAPLAT TNRAVQSLES NNRQHLGRIN 300 SSSTDSFSSF ASDSPHFPDL GRSSNTWQTA VPSNIQQLGQ NGSMSQASLH GNGPRMEPVS 360 SYTPPSNQIT SLGNDMQNQV APLASNTLPM VFNQGAAPFT FGNSTNSREA LNSNLAFSNS 420 GINTSLPNLC IDNSVVPRQT LDGGNTGGVP SLQDGKIDQQ AVGNQLNYNN NDLVGTSGLQ 480 RELSGGLDDI VVDMFRPDND NGGIFIDTDW GLV

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MKGITHGACD YLLKPVRLEQ LKTIWQHVIR RNTKNRGSDN DDAGQKGPNA EGENGGANRN  60
KRQSRRDRDD NGDDGDDSDE NSNDNGDSSS QKKPRVVWSV ELHRKFVAAV NQLGIDKAVP  120
KKILDLMNVE NITRENVASH LQKYRLYLKR MSMDASRQAN LVAALGGRNP AYSNMNSMDV  180
FRHYNNAYGR YRPVPTSSHS QSNNLVARMN SPSAYGMHGL LSPQSQPLHL GHAQNNLGTS  240
LNDLGVNNGN LIRGAHMSTM GTGTSGNSFA NISNGAPLAT TNRAVQSLES NNRQHLGRIN  300
SSSTDSFSSF ASDSPHFPDL GRSSNTWQTA VPSNIQQLGQ NGSMSQASLH GNGPRMEPVS  360
SYTPPSNQIT SLGNDMQNQV APLASNTLPM VFNQGAAPFT FGNSTNSREA LNSNLAFSNS  420
GINTSLPNLC IDNSVVPRQT LDGGNTGGVP SLQDGKIDQQ AVGNQLNYNN NDLVGTSGLQ  480
RELSGGLDDI VVDMFRPDND NGGIFIDTDW GLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	2e-50	ARR-B family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG020030.7