PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG021740.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 354aa MW: 38319.5 Da PI: 7.7739

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG021740.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107	1e-33	39	93	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl TRIDC6AG021740.1 39 KPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 93 79****************************************************8 PP
2	Myb_DNA-binding	71.7	1.1e-22	41	92	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ TRIDC6AG021740.1 41 RLRWTVELHERFVDAVAQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 92 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MFSSKKATSS SAGAVAVQGG GAPMCVQGDS GLVLTTDPKP RLRWTVELHE RFVDAVAQLG 60 GPDKATPKTI MRVMGVKGLT LYHLKSHLQK FRLGKQPHKD FNDHAVKDAA AAMEMHRNAA 120 SSSGIMGRNM NDRNVHMNEA IRMQMEVQRR LHEQLEVQKH LQMRIEAQGK YMQSILEKAY 180 QTLATGDVAA SPTAGYKSLG SHAGVLDVCS IKDIGPASMG FPSLQDLHLY GGGHLDLQQQ 240 QPMESFFACS DGGGIGSLGK KRSNQYAGGK SPMMWGDDDD GDEDDKGDQL LQMAPPMMDD 300 IDSMYEAKPM MTMSGDSAGN RGFDGGMGSK LERPSSRRPH MGAQRMGSPS VIYG

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MFSSKKATSS SAGAVAVQGG GAPMCVQGDS GLVLTTDPKP RLRWTVELHE RFVDAVAQLG  60
GPDKATPKTI MRVMGVKGLT LYHLKSHLQK FRLGKQPHKD FNDHAVKDAA AAMEMHRNAA  120
SSSGIMGRNM NDRNVHMNEA IRMQMEVQRR LHEQLEVQKH LQMRIEAQGK YMQSILEKAY  180
QTLATGDVAA SPTAGYKSLG SHAGVLDVCS IKDIGPASMG FPSLQDLHLY GGGHLDLQQQ  240
QPMESFFACS DGGGIGSLGK KRSNQYAGGK SPMMWGDDDD GDEDDKGDQL LQMAPPMMDD  300
IDSMYEAKPM MTMSGDSAGN RGFDGGMGSK LERPSSRRPH MGAQRMGSPS VIYG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	5e-85	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG021740.1