PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG022250.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 175aa    MW: 19967.9 Da    PI: 9.8679
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG022250.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.91.1e-274494151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      krien +nrqvtfskRr g+lKKA+EL vLCda+v v+ifsstg+++eyss
  TRIDC6AG022250.2 44 KRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGRMFEYSS 94
                      79***********************************************96 PP
2K-box46.91.2e-16106175169
             K-box   1 yqkssgks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 
                       yq++++++  e ++ ++   e++++++e+e+L   +R++ G+dL+sLsl + + +eqqLe s+ k+R++K
  TRIDC6AG022250.2 106 YQNATNSQfEEINHDQQIFVEMTRMRNEMEKLDGAIRRYTGDDLSSLSLADVNDIEQQLEFSVAKVRARK 175
                       6777777777778889999**************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MIFFLLLTGE RPRGRPETRK AIAWFLFASI VAVAEMGRGK IEIKRIENAT NRQVTFSKRR  60
GGLLKKANEL AVLCDARVGV VIFSSTGRMF EYSSPASSLR DLIEQYQNAT NSQFEEINHD  120
QQIFVEMTRM RNEMEKLDGA IRRYTGDDLS SLSLADVNDI EQQLEFSVAK VRARK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09960.22e-40MIKC_MADS family protein