PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG022500.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 406aa    MW: 42688.3 Da    PI: 5.8976
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG022500.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3091.1e-94414054373
              GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                       l+l+cA+ ++ gdl  a+++   +   a p+gd+  Rla++f++ALa r  +  s++       +        + aa+ +++++ P+l+f+hl
  TRIDC6AG022500.2  41 LVLACADLLHRGDLDGARRAAGAVLSGADPRGDAADRLAHHFARALALRADEGRSSVGPLGVGVAP------ASSAAHLAYNKIAPFLRFAHL 127
                       789***********************************************9944444332232222......344455569************ PP

              GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl...va 183
                       taNqaIlea++g++rvHi+D+d+ +G+QWp+Llqa+ +R+    gpp++RiTg g+    + + l +tg+rL+ fA++l++pf+f++l    +
  TRIDC6AG022500.2 128 TANQAILEAAAGARRVHIVDLDAAHGVQWPPLLQAIGDRAdaaVGPPEVRITGAGP----DLDVLLRTGDRLRAFASSLNLPFRFHPLllpCT 216
                       ***************************************988889***********....9***************************66555 PP

              GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsle 272
                        +l++     L+++p+E+laVn+vl lhrl   +++l    +++L+ v+s++P vv+++e+e + +++    ++ +r++ a+++ysa+fd+le
  TRIDC6AG022500.2 217 AQLAADPAACLELHPDETLAVNCVLFLHRLS-GDGEL----TAFLRWVRSMNPAVVTIAEREGEAGRGedddELPRRVAAAMDFYSAVFDALE 304
                       5666677889********************7.44555....55*******************87754434559******************** PP

              GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkd 364
                       a++p+ s er  vE+e+lg ei  vva  g+    r +++e W ++ ++aG++p p s++a++qa+lllr ++ s+gy  ee +g+ +lgW++
  TRIDC6AG022500.2 305 ATMPPGSAERLAVEQEILGTEIDAVVAGPGSG-GGRPRSFEAWTAAARAAGLSPWPASTFAVSQARLLLRLHYpSEGYAAEEARGACFLGWQT 396
                       *******************************9.9*********************************************************** PP

              GRAS 365 rpLvsvSaW 373
                       r+L+svS+W
  TRIDC6AG022500.2 397 RTLMSVSSW 405
                       ********* PP
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
SHALRPPPAT AADAMLDPPE PDDDAARPPR APVAAASRRG LVLACADLLH RGDLDGARRA  60
AGAVLSGADP RGDAADRLAH HFARALALRA DEGRSSVGPL GVGVAPASSA AHLAYNKIAP  120
FLRFAHLTAN QAILEAAAGA RRVHIVDLDA AHGVQWPPLL QAIGDRADAA VGPPEVRITG  180
AGPDLDVLLR TGDRLRAFAS SLNLPFRFHP LLLPCTAQLA ADPAACLELH PDETLAVNCV  240
LFLHRLSGDG ELTAFLRWVR SMNPAVVTIA EREGEAGRGE DDDELPRRVA AAMDFYSAVF  300
DALEATMPPG SAERLAVEQE ILGTEIDAVV AGPGSGGGRP RSFEAWTAAA RAAGLSPWPA  360
STFAVSQARL LLRLHYPSEG YAAEEARGAC FLGWQTRTLM SVSSWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.14e-70GRAS family protein