PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG022500.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 392aa    MW: 41331.8 Da    PI: 5.7537
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG022500.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS309.29.5e-95273914373
              GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                       l+l+cA+ ++ gdl  a+++   +   a p+gd+  Rla++f++ALa r  +  s++       +        + aa+ +++++ P+l+f+hl
  TRIDC6AG022500.3  27 LVLACADLLHRGDLDGARRAAGAVLSGADPRGDAADRLAHHFARALALRADEGRSSVGPLGVGVAP------ASSAAHLAYNKIAPFLRFAHL 113
                       789***********************************************9944444332232222......344455569************ PP

              GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl...va 183
                       taNqaIlea++g++rvHi+D+d+ +G+QWp+Llqa+ +R+    gpp++RiTg g+    + + l +tg+rL+ fA++l++pf+f++l    +
  TRIDC6AG022500.3 114 TANQAILEAAAGARRVHIVDLDAAHGVQWPPLLQAIGDRAdaaVGPPEVRITGAGP----DLDVLLRTGDRLRAFASSLNLPFRFHPLllpCT 202
                       ***************************************988889***********....9***************************66555 PP

              GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsle 272
                        +l++     L+++p+E+laVn+vl lhrl   +++l    +++L+ v+s++P vv+++e+e + +++    ++ +r++ a+++ysa+fd+le
  TRIDC6AG022500.3 203 AQLAADPAACLELHPDETLAVNCVLFLHRLS-GDGEL----TAFLRWVRSMNPAVVTIAEREGEAGRGedddELPRRVAAAMDFYSAVFDALE 290
                       5666677889********************7.44555....55*******************87754434559******************** PP

              GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkd 364
                       a++p+ s er  vE+e+lg ei  vva  g+    r +++e W ++ ++aG++p p s++a++qa+lllr ++ s+gy  ee +g+ +lgW++
  TRIDC6AG022500.3 291 ATMPPGSAERLAVEQEILGTEIDAVVAGPGSG-GGRPRSFEAWTAAARAAGLSPWPASTFAVSQARLLLRLHYpSEGYAAEEARGACFLGWQT 382
                       *******************************9.9*********************************************************** PP

              GRAS 365 rpLvsvSaW 373
                       r+L+svS+W
  TRIDC6AG022500.3 383 RTLMSVSSW 391
                       ********* PP
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    
MLDPPEPDDD AARPPRAPVA AASRRGLVLA CADLLHRGDL DGARRAAGAV LSGADPRGDA  60
ADRLAHHFAR ALALRADEGR SSVGPLGVGV APASSAAHLA YNKIAPFLRF AHLTANQAIL  120
EAAAGARRVH IVDLDAAHGV QWPPLLQAIG DRADAAVGPP EVRITGAGPD LDVLLRTGDR  180
LRAFASSLNL PFRFHPLLLP CTAQLAADPA ACLELHPDET LAVNCVLFLH RLSGDGELTA  240
FLRWVRSMNP AVVTIAEREG EAGRGEDDDE LPRRVAAAMD FYSAVFDALE ATMPPGSAER  300
LAVEQEILGT EIDAVVAGPG SGGGRPRSFE AWTAAARAAG LSPWPASTFA VSQARLLLRL  360
HYPSEGYAAE EARGACFLGW QTRTLMSVSS WH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.15e-70GRAS family protein