PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG023850.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 196aa    MW: 20364.2 Da    PI: 10.6383
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG023850.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.16.3e-083257227
                      -S---SGGGGTS--TTTTT-SS-SSS CS
           zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHgp 27
                      kt+lC+ +     Ck Gd+C+FaHg+
  TRIDC6AG023850.2 32 KTKLCNKYNTAEGCKWGDKCHFAHGE 57
                      8***********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MSNLGGQAFA QPQGRMPAGS AVPDGQPTPT VKTKLCNKYN TAEGCKWGDK CHFAHGEREL  60
GKHTFINNSM PPRMGTRPIG HFGPPAMPGP AMTTPTGFGA SSTAKVSVDA SLVGGIIGRG  120
GVNTKQISGV TGAKLAIRLE DLTAAAAAVS REATSRPSCA TTSRKDRARL ATDATLPMAR  180
TSCANRLPRE VDLPTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06770.11e-12C3H family protein