PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG025850.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 222aa    MW: 24275.1 Da    PI: 4.677
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG025850.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.38.6e-11501072890
                        --..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                 B3  28 gkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                        ++  ++ ++t+ + + r ++vk+ y+++ ++++ ++GW++F ++n+L  g +vvF+ld+  + 
  TRIDC6AG025850.12  50 NV--TGEKVTFVS-NQRAYTVKC-YKGRIKSTMYGRGWRKFYEDNNLGKGQMVVFHLDEP-SP 107
                        33..334566666.6799*****.888888899***********************9874.33 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MAGAADAGVC GVCFNHCKYE SKGSGFSMVA WEEFKNAGVV PCNERAHFNN VTGEKVTFVS  60
NQRAYTVKCY KGRIKSTMYG RGWRKFYEDN NLGKGQMVVF HLDEPSPTAS ILWFQVGNGS  120
EDEQPMEEGD PIEDSDSGNE DGEASSDDGE GIVRTRGLLL NETEDAQLQG LLPLSDGFIG  180
FAFVHRLTRT DIRLGMMKIP KKVAAATPFE EQGVVGISVD GR