PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG025910.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 412aa MW: 45874.8 Da PI: 4.9786

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG025910.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.9	1.7e-18	235	346	2	91
FAR1 2 fYneYAkevGFsvrkskskks..krngeitkrtfvCskegkreeekkk.....................tekerrtraetrtgCkaklkvkke 71 fYneYA +GF ++k+ +++ +++ ++t++C+++gk e+ + k++r++ + tgC+ak+ +++ TRIDC6AG025910.1 235 FYNEYAAICGFAIKKAGNYHAtkPGGKTVSRYTYRCNRSGKVVGEDVLeekkkqrqlkkqektgilppeKAKRKRKNFIQITGCQAKIIATLK 327 **************999984334568999*****9755443344556799*******98888999999*********99 PP FAR1 72 kdgkwevtkleleHnHelap 91 +kw+vt ++leHnH+l+p TRIDC6AG025910.1 328 -GDKWVVTVVDLEHNHTLSP 346 .9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MCDRKNNKKM LTLLFLLLLI QNDTYMITEW YGRLQGQDEG GQPTGRQQAG NVDVGAEGFP 60 SWSWDGNTAE GHQGCSYQPR YREQDSDDGD FDFDEGEDDL DDDLDDEVAA GSSHGPSFPE 120 DMSLDGGLGD DSEAAGSSHG PSFTDGMSFD DVSDNGKQTD AHGKNKNVCD CDDQQEGEPV 180 QQENVEHLSQ EDILMFIESD SVCAAQAQTC SQEVRSHHVP YMGMVFDSCD AAHAFYNEYA 240 AICGFAIKKA GNYHATKPGG KTVSRYTYRC NRSGKVVGED VLEEKKKQRQ LKKQEKTGIL 300 PPEKAKRKRK NFIQITGCQA KIIATLKGDK WVVTVVDLEH NHTLSPPNES KYLRSHKKMT 360 EEEKLFIGTF NSVQMPTRKI MAILSYLRGG DAPYTKKYVS NVRTAINKEN GK

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MCDRKNNKKM LTLLFLLLLI QNDTYMITEW YGRLQGQDEG GQPTGRQQAG NVDVGAEGFP  60
SWSWDGNTAE GHQGCSYQPR YREQDSDDGD FDFDEGEDDL DDDLDDEVAA GSSHGPSFPE  120
DMSLDGGLGD DSEAAGSSHG PSFTDGMSFD DVSDNGKQTD AHGKNKNVCD CDDQQEGEPV  180
QQENVEHLSQ EDILMFIESD SVCAAQAQTC SQEVRSHHVP YMGMVFDSCD AAHAFYNEYA  240
AICGFAIKKA GNYHATKPGG KTVSRYTYRC NRSGKVVGED VLEEKKKQRQ LKKQEKTGIL  300
PPEKAKRKRK NFIQITGCQA KIIATLKGDK WVVTVVDLEH NHTLSPPNES KYLRSHKKMT  360
EEEKLFIGTF NSVQMPTRKI MAILSYLRGG DAPYTKKYVS NVRTAINKEN GK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	1e-15	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG025910.1