PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG025910.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 519aa MW: 57232.9 Da PI: 4.7423

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG025910.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.5	2.2e-18	345	456	2	91
FAR1 2 fYneYAkevGFsvrkskskks..krngeitkrtfvCskegkreeekkk.....................tekerrtraetrtgCkaklkvkke 71 fYneYA +GF ++k+ +++ +++ ++t++C+++gk e+ + k++r++ + tgC+ak+ +++ TRIDC6AG025910.3 345 FYNEYAAICGFAIKKAGNYHAtkPGGKTVSRYTYRCNRSGKVVGEDVLeekkkqrqlkkqektgilppeKAKRKRKNFIQITGCQAKIIATLK 437 **************999984334568999*****9755443344556799*******98888999999*********99 PP FAR1 72 kdgkwevtkleleHnHelap 91 +kw+vt ++leHnH+l+p TRIDC6AG025910.3 438 -GDKWVVTVVDLEHNHTLSP 456 .9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MFLDMKEADD EDKNRDKGKQ THQAILEQYG KFLMGTQVPG ETMAQGTPIS HGPVPVDPPY 60 VGAQYVQQQQ AGTRLAFQTS SSPFATHEMN FLGSGYMSYT QLLMAANQEA GIGGSQHSGQ 120 QQDSGGRGFC ENDTYMITEW YGRLQGQDEG GQPTGRQQAG NVDVGAEGFP SWSWDGNTAE 180 GHQGCSYQPR YREQDSDDGD FDFDEGEDDL DDDLDDEVAA GSSHGPSFPE DMSLDGGLGD 240 DSEAAGSSHG PSFTDGMSFD DVSDNGKQTD AHGKNKNVCD CDDQQEGEPV QQENVEHLSQ 300 EDILMFIESD SVCAAQAQTC SQEVRSHHVP YMGMVFDSCD AAHAFYNEYA AICGFAIKKA 360 GNYHATKPGG KTVSRYTYRC NRSGKVVGED VLEEKKKQRQ LKKQEKTGIL PPEKAKRKRK 420 NFIQITGCQA KIIATLKGDK WVVTVVDLEH NHTLSPPNES KYLRSHKKMT EEEKLFIGTF 480 NSVQMPTRKI MAILSYLRGG DAPYTKKYVS NVRTAINKE

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MFLDMKEADD EDKNRDKGKQ THQAILEQYG KFLMGTQVPG ETMAQGTPIS HGPVPVDPPY  60
VGAQYVQQQQ AGTRLAFQTS SSPFATHEMN FLGSGYMSYT QLLMAANQEA GIGGSQHSGQ  120
QQDSGGRGFC ENDTYMITEW YGRLQGQDEG GQPTGRQQAG NVDVGAEGFP SWSWDGNTAE  180
GHQGCSYQPR YREQDSDDGD FDFDEGEDDL DDDLDDEVAA GSSHGPSFPE DMSLDGGLGD  240
DSEAAGSSHG PSFTDGMSFD DVSDNGKQTD AHGKNKNVCD CDDQQEGEPV QQENVEHLSQ  300
EDILMFIESD SVCAAQAQTC SQEVRSHHVP YMGMVFDSCD AAHAFYNEYA AICGFAIKKA  360
GNYHATKPGG KTVSRYTYRC NRSGKVVGED VLEEKKKQRQ LKKQEKTGIL PPEKAKRKRK  420
NFIQITGCQA KIIATLKGDK WVVTVVDLEH NHTLSPPNES KYLRSHKKMT EEEKLFIGTF  480
NSVQMPTRKI MAILSYLRGG DAPYTKKYVS NVRTAINKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	2e-15	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG025910.3