PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG028100.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 99aa    MW: 10938.4 Da    PI: 10.0656
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG028100.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.84.6e-0950901154
                       HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHH..HHHHHH CS
                HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAv..eYIksL 54
                       rRR+riN+++  L+ l+P++      K +Ka++L +A+  eY+k+L
  TRIDC6AG028100.10 50 RRRSRINEKMKALQILIPNS-----NKTDKASMLDEAIliEYLKQL 90
                       89*****************7.....5***********544999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
MSRFRRHLEG ATGFYKSEMG GSSEPESHGT SDCPRGGGGS SSKCTRAAER RRSRINEKMK  60
ALQILIPNSN KTDKASMLDE AILIEYLKQL RLQVHEGVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67110.12e-20bHLH family protein