PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG028100.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 177aa    MW: 19440.6 Da    PI: 9.7534
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG028100.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.51.8e-06961251039
                        HHHHHHHHHHHHHHHCTSCCC...TTS-ST CS
                HLH  10 rrRRdriNsafeeLrellPkaskapskKls 39 
                        +rRR+riN+++  L+ l+P++ k + +K+s
  TRIDC6AG028100.11  96 KRRRSRINEKMKALQILIPNSNKVGTTKPS 125
                        8*******************7455555544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MSRFRRHLEG ATGFYKSEMG GSSEPESHGT SDCPRGGGGS SSKCTRAAEV HNLSERVVAR  60
FPVVNHFPLS FTPLFCSSRP IFLADHCLLA CLIGVKRRRS RINEKMKALQ ILIPNSNKVG  120
TTKPSTVPLC FSLSLNSGLL SLVVLVWLQT DKASMLDEAI LIEYLKQLRL QVHEGVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67110.15e-14bHLH family protein