PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG028100.18
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 194aa    MW: 21542.1 Da    PI: 9.4596
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG028100.18genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.32e-06961251039
                        HHHHHHHHHHHHHHHCTSCCC...TTS-ST CS
                HLH  10 rrRRdriNsafeeLrellPkaskapskKls 39 
                        +rRR+riN+++  L+ l+P++ k + +K+s
  TRIDC6AG028100.18  96 KRRRSRINEKMKALQILIPNSNKVGTTKPS 125
                        8*******************7445555544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MSRFRRHLEG ATGFYKSEMG GSSEPESHGT SDCPRGGGGS SSKCTRAAEV HNLSERVVAR  60
FPVVNHFPLS FTPLFCSSRP IFLADHCLLA CLIGVKRRRS RINEKMKALQ ILIPNSNKVG  120
TTKPSTVPLC FSLSLNSGLL SLVVLVWLQT DKASMLDEAI LIEYLKQLRL QVHVSKCMSQ  180
WLVDVETNLL VHLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.17e-14bHLH family protein