PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG028100.25

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 212aa MW: 23469.3 Da PI: 10.0958

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG028100.25	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.1	2.3e-06	114	143	10	39
HHHHHHHHHHHHHHHCTSCCC...TTS-ST CS HLH 10 rrRRdriNsafeeLrellPkaskapskKls 39 +rRR+riN+++ L+ l+P++ k + +K+s TRIDC6AG028100.25 114 KRRRSRINEKMKALQILIPNSNKVGTTKPS 143 8*******************7444555544 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
PAVQAPRRAR ALGYNFSAMS RFRRHLEGAT GFYKSEMGGS SEPESHGTSD CPRGGGGSSS 60 KCTRAAEVHN LSERVVARFP VVNHFPLSFT PLFCSSRPIF LADHCLLACL IGVKRRRSRI 120 NEKMKALQIL IPNSNKVGTT KPSTVPLCFS LSLNSGLLSL VVLVWLQTDK ASMLDEAILI 180 EYLKQLRLQV HVSKCMSQWL VDVETNLLVH LF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36930.1	1e-13	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG028100.25