PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG028100.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 105aa MW: 11935.2 Da PI: 10.1705

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG028100.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.1	2.4e-06	8	36	11	39
HHHHHHHHHHHHHHCTSCCC...TTS-ST CS HLH 11 rRRdriNsafeeLrellPkaskapskKls 39 rRR+riN+++ L+ l+P++ k + +K+s TRIDC6AG028100.5 8 RRRSRINEKMKALQILIPNSNKVGTTKPS 36 89*****************7455555554 PP

Sequence ? help Back to Top
Protein Sequence Length: 105 aa Download sequence
KCTRAAERRR SRINEKMKAL QILIPNSNKV GTTKPSTVPL CFSLSLNSGL LSLVVLVWLQ 60 TDKASMLDEA ILIEYLKQLR LQVHVSKCMS QWLVDVETNL LVHLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67110.1	5e-14	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG028100.5