PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG028100.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 186aa    MW: 20170 Da    PI: 10.4633
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG028100.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.17.6e-091401811054
                       HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHH..HHHHHH CS
               HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAv..eYIksL 54 
                       +rRR+riN+++  L+ l+P++      K +Ka++L +A+  eY+k+L
  TRIDC6AG028100.6 140 KRRRSRINEKMKALQILIPNS-----NKTDKASMLDEAIliEYLKQL 181
                       8*******************7.....5***********544999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
ERGSGDIPGG RGRRVPGGRR GGWGICVPTS TSRSSSSCCA SPSSSPRFRR HLEGATGFYK  60
SEMGGSSEPE SHGTSDCPRG GGGSSSKCTR AAEVHNLSER VVARFPVVNH FPLSFTPLFC  120
SSRPIFLADH CLLACLIGVK RRRSRINEKM KALQILIPNS NKTDKASMLD EAILIEYLKQ  180
LRLQVH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67110.17e-20bHLH family protein