PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG033760.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 771aa MW: 87102.8 Da PI: 9.1686

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG033760.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.8	1.6e-17	11	94	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA++vGF v++++s+ s ++g++ +++C k g+++ e k r+ra++ t+C a+++vk++ d+ +v+ +l+HnH+++ TRIDC6AG033760.9 11 RFYRRYARRVGFGVSVRRSSFS-QEGTCLYLELMCCKGGRPRYEPKF-----RKRASSTTNCPARIRVKLWGDKLLHVELANLDHNHPVS 94 5***************9999.6677************9988.....99*******************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 771 aa Download sequence
MVFNNHMEVN RFYRRYARRV GFGVSVRRSS FSQEGTCLYL ELMCCKGGRP RYEPKFRKRA 60 SSTTNCPARI RVKLWGDKLL HVELANLDHN HPVSPAMARF LNSYKQLSGP AKRRLRMGGP 120 GAMPVEEPSK MPVDKLGALE ELLFGESKNH SFVERGRLKL QPGDSEALRL FFTRMQAKNA 180 NFFNVIDLDD EGCVRNVFWA DAWSRAMYEY YNDAITLDTS YVVSKHDMPL VTFLGVNHHG 240 QSVLLGCGLL SDETAETYTW LFKAWVACMS GNLPKAIITD QCRGIQSAVA EVVPGVRHRI 300 CLHQIMKKAA EQLSGLSEYK AISKALQKAA YDSLTVDEFE GEWSTLITYN GLQGHDWLRS 360 LYECRFSWVP IFLKDAFWAG MSATQRSETI TPFFEGYVDL KTSLKQFLGK YEMILQSKYE 420 KEAQADFETF HKQRPPVSKF YMEEQLSKVY THNMFKKLQD EIEAIMYCHV SLMNGDGPIS 480 TFNVKECIFL EDGKRTMSKI FAVTYNTEEK DITCICGGFQ FSGILCRHSL SVLKFQQVRE 540 VPSQYVLDRW KKDFRQLHVM GRLSSDVVPD NRVDRYDYLS MRCLQLVDSA VLSDKYRLAL 600 RLVREVEKFL LNSNTHDDTQ PRIKSRIPKV KPNTVTGQNL VNVVTDNGNG GPKGPEASAS 660 AQASQIQKGV AEKAVVPAGY IGVPANVQQF MGNQAAMRPS IVYMVPSGVD PQAFGNGVLM 720 PVMYQQMFQI PQQPNGAAQD TLANGKRKRP RAQKPTETSH QSNGTSGPAA G

Sequence ? help Back to Top

Protein Sequence Length: 771 aa Download sequence

MVFNNHMEVN RFYRRYARRV GFGVSVRRSS FSQEGTCLYL ELMCCKGGRP RYEPKFRKRA  60
SSTTNCPARI RVKLWGDKLL HVELANLDHN HPVSPAMARF LNSYKQLSGP AKRRLRMGGP  120
GAMPVEEPSK MPVDKLGALE ELLFGESKNH SFVERGRLKL QPGDSEALRL FFTRMQAKNA  180
NFFNVIDLDD EGCVRNVFWA DAWSRAMYEY YNDAITLDTS YVVSKHDMPL VTFLGVNHHG  240
QSVLLGCGLL SDETAETYTW LFKAWVACMS GNLPKAIITD QCRGIQSAVA EVVPGVRHRI  300
CLHQIMKKAA EQLSGLSEYK AISKALQKAA YDSLTVDEFE GEWSTLITYN GLQGHDWLRS  360
LYECRFSWVP IFLKDAFWAG MSATQRSETI TPFFEGYVDL KTSLKQFLGK YEMILQSKYE  420
KEAQADFETF HKQRPPVSKF YMEEQLSKVY THNMFKKLQD EIEAIMYCHV SLMNGDGPIS  480
TFNVKECIFL EDGKRTMSKI FAVTYNTEEK DITCICGGFQ FSGILCRHSL SVLKFQQVRE  540
VPSQYVLDRW KKDFRQLHVM GRLSSDVVPD NRVDRYDYLS MRCLQLVDSA VLSDKYRLAL  600
RLVREVEKFL LNSNTHDDTQ PRIKSRIPKV KPNTVTGQNL VNVVTDNGNG GPKGPEASAS  660
AQASQIQKGV AEKAVVPAGY IGVPANVQQF MGNQAAMRPS IVYMVPSGVD PQAFGNGVLM  720
PVMYQQMFQI PQQPNGAAQD TLANGKRKRP RAQKPTETSH QSNGTSGPAA G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-132	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG033760.9