PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG035210.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 141aa MW: 15906.4 Da PI: 10.7338

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG035210.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd lv ++q+G +W++ ++ g+ R++k+c++rw +yl TRIDC6AG035210.2 14 RGPWTAEEDMTLVAHIEQHGHSNWRALPKQAGLLRCGKSCRLRWINYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	54.2	3.4e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE+e +++++++lG++ W+tIa++++ gRt++++k+ w+++l TRIDC6AG035210.2 67 RGNFTCEEEEAIIQLHAMLGNR-WSTIAARLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence
MGRAPCCEKM GLKRGPWTAE EDMTLVAHIE QHGHSNWRAL PKQAGLLRCG KSCRLRWINY 60 LRPDIKRGNF TCEEEEAIIQ LHAMLGNRWS TIAARLPGRT DNEIKNVWHT HLKKRLESSS 120 KTSGQAAPKR KAKKPAVAAT A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	5e-76	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG035210.2