PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG036020.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 209aa MW: 21985.7 Da PI: 9.9318

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG036020.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	111.6	1.1e-34	53	144	8	102
TCP 8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg.........k 89 +++h+kv+gR+RRvR+++ caar+F+L++eLG+++d++tieWLl+qa+p+i ++tgt++++a ++ +a s sss+ + k TRIDC6AG036020.2 53 VKDRHSKVNGRGRRVRMPIVCAARVFQLTRELGLKSDGQTIEWLLRQAEPSILAATGTGTTPAAFVssSAPSTSSSS-----SfsyphtllgK 140 59********************************************************9999966632111111111.....11122233331 PP TCP 90 aaksaakskksqk 102 ++++ TRIDC6AG036020.2 141 ---------RPRE 144 .........2222 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
KQSADAMTSH DIAAASSPFH VYQQHLPMTM APAAASADAG LAPAASKKAG GSVKDRHSKV 60 NGRGRRVRMP IVCAARVFQL TRELGLKSDG QTIEWLLRQA EPSILAATGT GTTPAAFVSS 120 SAPSTSSSSS FSYPHTLLGK RPREEENDAF GAGAATSAFW AALQAPPRQD TWGFSPLDAQ 180 AAYMPMAQVH HHHLNLVAAL SGAARRAEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	3e-29	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG036020.2