PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG036490.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 247aa    MW: 26949.5 Da    PI: 10.4478
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG036490.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.92.6e-096299136
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS- CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRt 36
                      +g W++eEd++l d++ ++G g+W++ +++ g   +R+
  TRIDC6AG036490.2 62 KGLWSPEEDQKLRDYILRHGHGCWSALPAKAGkaDHRS 99
                      678***************************99666666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
PERSSISIPR LEPEASAAAA AASCRPTSPR FRAALRRSSA CKQASKAMGC KACDKPRPSY  60
RKGLWSPEED QKLRDYILRH GHGCWSALPA KAGKADHRSL VRICRSTERR HNSGEFGAFG  120
SKIGFSGTGD RRPSTEFRPL SGQLVRIGLD LFVGVISSIC PEREMHIGWL VLTSDHDSAR  180
RAPAERQELQ AAVDQLPAAG AEARHVLAGG GGDGDEPPRR PRQQVSSPVQ HTPFTYLLSA  240
LYFTARK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48920.17e-13MYB family protein