PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG036510.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 225aa    MW: 24196.2 Da    PI: 6.7858
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG036510.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.59.6e-163479148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg++T+eE++ +v+++   G++ W+ Ia+ ++ gRt++++k++w+++l
  TRIDC6AG036510.4 34 RGPFTAEEQKSIVQLHGIVGNK-WSMIAAQLP-GRTDNEIKNYWNTHL 79
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MCELHWVALP AELNRCGKSC RLRWTNYLRP DIKRGPFTAE EQKSIVQLHG IVGNKWSMIA  60
AQLPGRTDNE IKNYWNTHLK KQLRRMGLDE PPPGPTAGCP AARHMAQWET ARLEAEARLS  120
LLSSSGAAAT ATTSGSASSS STAAAGAAVA DHTKPADVFL RLWNSDIGSS FRKAAAPVSV  180
KEEEAVVPGD DSSAASNEMD SAAAAAEYQM FLDFAGEELG LFHGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.14e-46MYB family protein