PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG037100.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 203aa    MW: 23055.8 Da    PI: 5.5646
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG037100.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix89.14.8e-28182487
          trihelix  4 kqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
                      ++e+ aLi++r+em+ ++r+++lk+p Weevs+k++e g++rs+k+Ckek+en+ k+y+++keg+ +r  ++ +++++f++lea
  TRIDC6AG037100.1  1 REETVALIRIRSEMDGAFRNAALKAPVWEEVSRKLAELGYRRSAKKCKEKFENVDKYYRRTKEGRAGR--QDGKNYRFFKELEA 82
                      68****************************************************************97..66678******985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
REETVALIRI RSEMDGAFRN AALKAPVWEE VSRKLAELGY RRSAKKCKEK FENVDKYYRR  60
TKEGRAGRQD GKNYRFFKEL EALHAAAPQQ NQRMATAAPI LPDPRPLAMA PAYPGAGLPD  120
LSLSSNSESE SDDESDEEED QAGGGGGRSN ESMMALFEGM IKQITEKQDA TQRLFLETLE  180
KWEADRTARE EAWRRQELAR ISR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.14e-48Trihelix family protein