PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG038130.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 704aa    MW: 73495.3 Da    PI: 6.2699
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG038130.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS281.62.3e-863467033374
              GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                       + L ++A+a ++g+ + a+++Larl+++  p g+p+ R a+y+ eAL   la+      +  +++ ts+ +++ +laa+k fs++sP+l+f++
  TRIDC6AG038130.1 346 DELAAAAKAAEAGNSTGAREILARLNHQLPPLGKPFLRSASYLREALLLALAD-----GHHGASRITSPLDVALKLAAYKSFSDLSPMLQFAN 433
                       7899*************************************************.....444455556666799******************** PP

              GRAS  96 ltaNqaIleavege..ervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182
                       +ta qa+l++++ +  +++H+iDfd++ G+QW+++lq+La R+       p l++T+++s +s++  el+ t+++L++fA+ lg+pfefn++ 
  TRIDC6AG038130.1 434 FTATQALLDEIACSaaSCIHVIDFDLGVGGQWASFLQELAHRRgtggVALPLLKLTAFVSDASHHPLELHLTQDNLTQFAADLGIPFEFNAV- 525
                       *********988776699************************976544599****************************************8. PP

              GRAS 183 akrledleleeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                         +l+++++ eL  ++ +E +aV+l +          +l+     +L+lvk+l Pk+vv ++  ad+ + +F ++fl++++ ++ l+dsl+a 
  TRIDC6AG038130.1 526 --SLDAFSPAELISSTgDEIVAVSLPVGCSARA---PPLAV----ILRLVKQLGPKIVVAMDYGADRADLPFSQHFLHCFQSCMFLLDSLDAA 609
                       ..99*******9888889********9777665...55555....*********************************************888 PP

              GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpL 367
                        + +++ + k+E++l++++++++v  + +       ++ +Wr+ + +aGF+pvpls+ a++qa++ll++v+++g++ve++  +l+l+W++ +L
  TRIDC6AG038130.1 610 -GIDADSACKIEKFLIQPRVEDAVLGRRKT-----DKAVSWRNVFAAAGFTPVPLSNLAEAQADCLLKRVQVRGFHVEKRGVALTLYWQRGEL 696
                       .7899*******************987776.....7889****************************************************** PP

              GRAS 368 vsvSaWr 374
                       vsvSaWr
  TRIDC6AG038130.1 697 VSVSAWR 703
                       ******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 704 aa     Download sequence    
MRAALFGAER SGGVGLAGGK DLCYWPPGKL LVEPRSVLDC SRRLSSPPNS ASTLSSSLGG  60
GAADSTGVAA VSESSAGDAE ATKWADHAAG GGGGGCELPP IPGALDGGEG WDAMLGSAAA  120
AAAAGQDQTF LNWIMGAAGD LELPVPPLPM HQQPLVDNAG GFGFSAVDPL GFSLDHHLGG  180
ASSDLSSSGA MSHTTTGGGG GGGSKASSAF GLFSPEAASL QPPPPPILFH EGIDTKPPLL  240
GPQSHGLFNQ YQQQHQPPPP AAAFFMPLAS FSDHNQRSQL HQPPPKRHHS VPDDLYLTRN  300
HLGTSAAAAF PLLHGSLPFQ LQPSPPPLRG AMKTTAAEAA QQQLLDELAA AAKAAEAGNS  360
TGAREILARL NHQLPPLGKP FLRSASYLRE ALLLALADGH HGASRITSPL DVALKLAAYK  420
SFSDLSPMLQ FANFTATQAL LDEIACSAAS CIHVIDFDLG VGGQWASFLQ ELAHRRGTGG  480
VALPLLKLTA FVSDASHHPL ELHLTQDNLT QFAADLGIPF EFNAVSLDAF SPAELISSTG  540
DEIVAVSLPV GCSARAPPLA VILRLVKQLG PKIVVAMDYG ADRADLPFSQ HFLHCFQSCM  600
FLLDSLDAAG IDADSACKIE KFLIQPRVED AVLGRRKTDK AVSWRNVFAA AGFTPVPLSN  660
LAEAQADCLL KRVQVRGFHV EKRGVALTLY WQRGELVSVS AWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.12e-90GRAS family protein