PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG038300.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 126aa    MW: 13595.4 Da    PI: 10.6124
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG038300.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.91.8e-054061223
                      EETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                      +C+ C ++F ++  L  H+r+H
  TRIDC6AG038300.1 40 TCKLCFRRFASPRALAGHMRSH 61
                      6********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
YILTSAAALS FAPVLSPRHS SSCHAFPERA PQALAMAKNT CKLCFRRFAS PRALAGHMRS  60
HSVRNPAAKQ QISSASSAST SFTAAADGDV SFKKPLPIYA LRENPKRNLR VTDVAFSDRE  120
SEAEST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16610.14e-07C2H2 family protein