PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG038300.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 112aa MW: 11500 Da PI: 5.0222

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG038300.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.00041	37	58	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +Cp+C ++F + L H r+H TRIDC6AG038300.3 37 ECPYCYRVFASGQALGGHKRSH 58 5******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 112 aa Download sequence
CAPPIAPPPP PPQPLAPAPL MEREGDEDMD GKGSPRECPY CYRVFASGQA LGGHKRSHVC 60 SAAAAAAQAH AAAAPPAPIK AFGMIDLNIA LPFEDVELSA VSDPRFSSNP GS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	2e-11	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG038300.3