PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG039160.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 262aa    MW: 28494.1 Da    PI: 9.2525
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG039160.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.50.000552262571854
                       HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  18 safeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       +++  L++++ +      +K + a++L ++++YIk L
  TRIDC6AG039160.4 226 EKITALQQIVSPF-----GKTDTASVLFETIKYIKFL 257
                       5778888888887.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MFEDVPAGRY AAAPALAPRF EAGSDVSPIK YEVVASPLFM GSGSNAALEA QGMNMMSGMP  60
SYADDHHHHQ RKEGINHPQQ EHGNPMASFL QHISTRTSAA MHASLDYSGL GALDKICQDG  120
RAMEAASPFS LRSLPDFGSI GGYKPTKEST LVPPYMRSAD RPDRSRQEQE ILPARSSSSG  180
SGPPAATDRK KRTSEERREI TVKKSKQEAS TASPPKQPVP KVKLGEKITA LQQIVSPFGK  240
TDTASVLFET IKYIKFLHEQ VQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31050.12e-19bHLH family protein