PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG039570.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 217aa    MW: 23195.9 Da    PI: 4.9309
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG039570.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.6e-1854104155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                       + ykGVr++   grWv+e+r+p     +  +r++lg+f tae+Aa+a++ a+++l+g
  TRIDC6AG039570.1  54 PVYKGVRRRN-PGRWVCEVREP-----HskQRIWLGTFETAEMAARAHDVAALALRG 104
                       68*****887.9******9996.....335*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MDLSALSSDY SSGTPSPVGA DGGNSEGFSA YMTVSSAPPK RRAGRTKFKE TRHPVYKGVR  60
RRNPGRWVCE VREPHSKQRI WLGTFETAEM AARAHDVAAL ALRGRAACLN FADSPRRLRV  120
PPVGASPDEI RRAAVEAAEA FLPAPDQSNA AAEEVAVAPT EQFAGDPYYG MDDGMDFGMQ  180
GYLDMAQGML IAPPPMAGPS ATVGDGDDDG EVSLWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.12e-38ERF family protein