PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG039700.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 212aa MW: 22623.6 Da PI: 9.8464

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG039700.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.1	4.3e-25	130	173	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 ++epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr rsrk++e TRIDC6AG039700.1 130 EPEPGRCRRTDGKKWRCSRDVVQGHKYCERHVHRGRGRSRKPVE 173 69***************************************998 PP
2	QLQ	53.4	7.7e-19	64	100	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 sa+T +Q q+L++Q+l+y+y+aa++PvP +L+++i+k TRIDC6AG039700.1 64 SALTFMQQQELEHQVLIYRYFAAGAPVPVHLVLPIWK 100 799*********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MADEKEADSL QPPSKQPRLS SADSNAGAVT MAVLSPLGLG LGLGLGGDSR GEQQAFEARA 60 AAKSALTFMQ QQELEHQVLI YRYFAAGAPV PVHLVLPIWK SVAASSFGPH RFPSLIGLGS 120 LCFDYRSSME PEPGRCRRTD GKKWRCSRDV VQGHKYCERH VHRGRGRSRK PVEGAPSARA 180 HSDSTATAPP CAIGFSPAGI LHATHSAAAR AT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36400.1	1e-38	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG039700.1