PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG039820.24
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 258aa    MW: 28564.3 Da    PI: 9.3032
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG039820.24genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.91.1e-133680147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                       r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC6AG039820.24 36 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 80
                       789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MVSTNPPPPL SEAAAAASSD DASKKVRKPY TITKSRESWT EQEHDKFLEA LQLFDRDWKK  60
IEAFVGSKTV IQIRSHAQKY FLKVQKNGTS EHVPPPRPKR KAAHPYPQKA SKNESGYALK  120
TDPSAMLRNS GMNVAVSPWT HNSIPPVVAS SFMKEDLGAG SMGPNIFCSS SSEGPPRAWQ  180
SGETNDQINQ VPSLRIMPDF AQVYSFLGSV FDPSTKGHLQ KLKEMNPIDV ETALLLMRNL  240
SINLTSPDFE DQVTSLIH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.15e-83MYB_related family protein