PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG039950.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 414aa    MW: 44265.5 Da    PI: 8.7218
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG039950.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B395.82.8e-3097194192
                       EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr. 87 
                       f+kv tpsdv+k++rlv+pk++ae++    +  +e++  l +ed+ g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+ 
  TRIDC6AG039950.2  97 FDKVVTPSDVGKLNRLVIPKQYAEKYfpldSAANEKGLLLNFEDSAGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFSRGaGEa 189
                       89***************************955556888*************************************************653444 PP

                       SEE.. CS
                B3  88 sefel 92 
                        + +l
  TRIDC6AG039950.2 190 ARHRL 194
                       44444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    
MEFTATSSRF SKGEEEVEEE QEEASMPREI PFMTAAAATS AAAPSASASA STPASAAVSA  60
SPAGSSPPFR SGDDAGASGS GGGGGGVAEA VEKEHMFDKV VTPSDVGKLN RLVIPKQYAE  120
KYFPLDSAAN EKGLLLNFED SAGKPWRFRY SYWNSSQSYV MTKGWSRFVK EKRLDAGDTV  180
SFSRGAGEAA RHRLFIDWKR RADTRDPLRL PRLPLPMPLT SHYSPWGLGA GGRGFFMPPS  240
PPATLYEHRL RQGFDFRGMN PSYPTMGRQV ILFGSAARMP PHTPAPLLVP RPPPPLHFTV  300
QQQGSGAGVS VTAGSPVVLD SVPVIESPTT ATKKRVRLFG VNLDNPQHPG DGGDESSNYG  360
SALPLQMPAS AWRPRDHTLR LLEFPSHGAG AEASSPSSSS SSKREAHSGL DLDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.12e-57B3 family protein